PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn004071
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 312aa    MW: 33911.3 Da    PI: 7.2544
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn004071genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.95.3e-341670155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Achn004071 16 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 70
                79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.6881373IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.4E-321471IPR009057Homeodomain-like
SuperFamilySSF466896.81E-181470IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-251671IPR006447Myb domain, plants
PfamPF002491.2E-91869IPR001005SANT/Myb domain
PfamPF143791.6E-23115161IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MIGGNSLDNN PSLSSKQRLR WTHELHERFV DAVAQLGGPD RATPKGVLRV MGVQGLTIYH  60
VKSHLQKYRL AKYLPDSSCD DQFIDTCLKL MMQGNKADKK ESEDMLSSLD GSSGMQITEA  120
LKLQMEVQKR LHEQLEVQRQ LQLRIEAQGK YLKKIIEEQQ RLGGVLSEVP GSGASAPESD  180
TKTDPATPAV PTLDSPLLDN KATKERALAK SLSIDESLSS PREPLTPDSG CRGSGSPKGS  240
RPVKKQRVSM GGAYAKPETE IILTHGILDS SLSPPYQQPH SVFLASEQFN HPSGISLGNE  300
DQFGNVSGSN L*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002272588.21e-155PREDICTED: protein PHR1-LIKE 1-like isoform X1
RefseqXP_010647085.11e-155PREDICTED: protein PHR1-LIKE 1-like isoform X1
RefseqXP_010647086.11e-155PREDICTED: protein PHR1-LIKE 1-like isoform X1
RefseqXP_010647087.11e-155PREDICTED: protein PHR1-LIKE 1-like isoform X1
TrEMBLA5C9661e-155A5C966_VITVI; Putative uncharacterized protein
STRINGVIT_00s0475g00040.t011e-154(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-103G2-like family protein